That's tough to say. Even though it's only been a week, your roots will have certainly dug deeper into the soil by now. I didn't know you were talking about clones, I thought maybe you were referring to seedlings in your first post. Those plants are going to need some nurturing to bring them back to health, and another transplant may be rough on them.

If the soil is staying overly soggy when you water, and is obviously stressing the plant, then it may be worth the time/risk of a transplant. But be prepared to possibly shock the plant more than it already looks to be. Are you currently using any fertilizers? Also, do you know what your pH is like? Looks like you've got some other issues besides soggy soil.